Source Data for Li, X., Han, H., Evangelou, N. et al. Machine learning-assisted crystal engineering of a zeolite. Nat Commun 14, 3152 (2023). https://doi.org/10.1038/s41467-023-38738-5. Data here includes all raw data and an explanatory Excel document with eight sheets. All raw data are indexed by entry number from Li et al, 2023. Machine operable verisons of the summary sheet is also included. Codes applied for machine learning are provided in a zip folder.